polyzymd
polyzymd.builders.enzyme
polyzymd.builders.polymer
polyzymd.builders.solvent
polyzymd.builders.substrate
polyzymd.builders.system_builder
polyzymd.compare.binding_free_energy_formatters
polyzymd.compare.cli
polyzymd.compare.comparators.binding_free_energy
polyzymd.compare.comparators.contacts
polyzymd.compare.comparators.distances
polyzymd.compare.comparators.exposure
polyzymd.compare.comparators.polymer_affinity
polyzymd.compare.comparators.rmsf
polyzymd.compare.comparators.triad
polyzymd.compare.config
polyzymd.compare.core.base
polyzymd.compare.core.registry
polyzymd.compare.plotters.binding_free_energy
polyzymd.compare.plotters.exposure
polyzymd.compare.plotters.polymer_affinity
polyzymd.compare.polymer_affinity_formatters
polyzymd.compare.results.binding_free_energy
polyzymd.compare.results.exposure
polyzymd.compare.results.polymer_affinity
polyzymd.compare.settings
polyzymd.compare.statistics
polyzymd.config.loader
polyzymd.config.schema
polyzymd.core.parameters
polyzymd.core.restraints
polyzymd.simulation.continuation
polyzymd.simulation.runner
polyzymd.workflow.daisy_chain
polyzymd.workflow.slurm